dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01666
Location and strand information: 1507 - 3015 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 4.9792
Protein molecular weight: 57365.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01667
Location and strand information: 3073 - 4383 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6785
Protein molecular weight: 49834.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01668
Location and strand information: 4456 - 6606 (-)
Family: GH112
Protein type: CAZyme
Protein description: D-galactosyl-beta-1->4-L-rhamnose phosphorylase
Protein isoelectric point: 4.773
Protein molecular weight: 81472.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01669
Location and strand information: 6749 - 8161 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1748
Protein molecular weight: 53296.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01670
Location and strand information: 8162 - 9214 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.8887
Protein molecular weight: 39452.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01671
Location and strand information: 9382 - 11115 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01672
Location and strand information: 11204 - 12133 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01673
Location and strand information: 12146 - 13099 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01674
Location and strand information: 13527 - 14525 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002247_27|CGC1
Gene ID: MGYG000002247_01675
Location and strand information: 14537 - 15955 (-)
Family: 2.A.66.1.33
Protein type: TC
Protein description: Multidrug export protein MepA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002247_01666	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	1507	3015	-	GH51
MGYG000002247_01667	hypothetical protein	CAZyme	3073	4383	-	GH28
MGYG000002247_01668	D-galactosyl-beta-1->4-L-rhamnose phosphorylase	CAZyme	4456	6606	-	GH112
MGYG000002247_01669	hypothetical protein	CAZyme	6749	8161	-	CE12
MGYG000002247_01670	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	8162	9214	-	GH105
MGYG000002247_01671	hypothetical protein	null	9382	11115	-	No domain
MGYG000002247_01672	hypothetical protein	TC	11204	12133	-	3.A.1.1.29
MGYG000002247_01673	putative multiple-sugar transport system permease YteP	TC	12146	13099	-	3.A.1.1.29
MGYG000002247_01674	HTH-type transcriptional activator RhaS	TF	13527	14525	+	HTH_AraC+HTH_AraC
MGYG000002247_01675	Multidrug export protein MepA	TC	14537	15955	-	2.A.66.1.33
Protein ID	Protein Name	Type	Start	End	Strand	Signature